Brownian Dynamics of Active Sphere Suspensions Confined Near a No-Slip Boundary
نویسندگان
چکیده
We develop numerical methods for performing efficient Brownian dynamics of col-loidal suspensions confined to remain in the vicinity of a no-slip wall by gravity or active flows. We present a stochastic Adams-Bashforth integrator for the Brown-ian dynamic equations, which is second-order accurate deterministically and uses a random finite difference to capture the stochastic drift proportional to the divergence of the mobility matrix. We generate the Brownian increments using a Krylov method, and show that for this geometry the number of iterations is independent of the number of particles. This allows us to develop an implementation on Graphical Processing Units (GPUs) that can efficiently simulate many thousands of particles over relevant timescales. We demonstrate the utility of our methods by simulating a recently-observed fingering instability in an active suspension of colloidal rollers. Our numerical experiments show that the thermal fluctuations are critical to set the characteristic height of the colloids above the wall, which in turn controls the growth rate of the fingering instability.
منابع مشابه
Large scale Brownian dynamics of confined suspensions of rigid particles.
We introduce methods for large-scale Brownian Dynamics (BD) simulation of many rigid particles of arbitrary shape suspended in a fluctuating fluid. Our method adds Brownian motion to the rigid multiblob method [F. Balboa Usabiaga et al., Commun. Appl. Math. Comput. Sci. 11(2), 217-296 (2016)] at a cost comparable to the cost of deterministic simulations. We demonstrate that we can efficiently g...
متن کاملBroadband boundary effects on Brownian motion.
Brownian motion of particles in confined fluids is important for many applications, yet the effects of the boundary over a wide range of time scales are still not well understood. We report high-bandwidth, comprehensive measurements of Brownian motion of an optically trapped micrometer-sized silica sphere in water near an approximately flat wall. At short distances we observe anisotropic Browni...
متن کاملBrownian dynamics of confined suspensions of active microrollers.
We develop efficient numerical methods for performing many-body Brownian dynamics simulations of a recently observed fingering instability in an active suspension of colloidal rollers sedimented above a wall [M. Driscoll, B. Delmotte, M. Youssef, S. Sacanna, A. Donev, and P. Chaikin, Nat. Phys. (2016), preprint arXiv:1609.08673. We present a stochastic Adams-Bashforth integrator for the equatio...
متن کاملBrownian dynamics of a sphere between parallel walls
– We describe direct imaging measurements of a colloidal sphere’s diffusion between two parallel surfaces. The dynamics of this deceptively simple hydrodynamically coupled system have proved difficult to analyze. Comparison with approximate formulations of a confined sphere’s hydrodynamic mobility reveals good agreement with both a leading-order superposition approximation as well as a more gen...
متن کاملUnsteady Stokes flow near boundaries: the point-particle approximation and the method of reflections
Problems of particle dynamics involving unsteady Stokes flows in confined geometries are typically harder to solve than their steady counterparts. Approximation techniques are often the only resort. Felderhof (see e.g. 2005, 2009b) has developed a point-particle approximation framework to solve such problems, especially in the context of Brownian motion. Despite excellent agreement with past ex...
متن کامل